B.H. Bradshaw-Hajek, S.J. Miklavcic, D.A. Ward, (2013) A composite Level Set and Extended-Domain-Eigenfunction Method for simulating 2D Stokes flow involving a free surface, Journal of Computational and Applied Mathematics
C.J. Brien, B. Berger, H. Rabie and M. Tester, (2013) Accounting for variation in designing greenhouse experiments with special reference to greenhouses containing plants on conveyor systems, Plant Methods 9 (5).
J. Cai, S.J. Miklavcic, Automatic curve selection for lens distortion correction using Hough transform energy, accepted for publication in the proceedings of WACV 2013.
J. Aarao, S.J. Miklavcic, D.A. Ward, (2013) Extended-domain-eigenfunction method (EDEM): a study of ill-posedness and regularization, J. Phys. A: Math. Theor. 46
S. Kurtek, A. Srivastava, E. Klassen, and H. Laga. (2013) Landmark-Guided Elastic Shape Analysis of Spherically-Parameterized Surfaces. Computer Graphics Forum (Proceedings of Eurographics 2013), 32(2)
R.J. Moitsheki, B.H. Bradshaw-Hajek (2013) Symmetry analysis of a heat conduction model for heat transfer in a longitudinal rectangular fin of a heterogeneous material, Communications in Nonlinear Science and Numerical Simulation, Volume 18, Issue 9, Pages 2374-2387
C.J. Brien, R.A. Bailey, T.T. Tran, and J. Boland, (2012) Quasi-Latin designs. Electronic Journal of Statistics, 6, 1900-1925.
C.J. Brien, (2012) Comments on 'Therapist variation within randomized trials of psychotherapy: Implications for precision, internal and external validity', Statistical Methods in Medical Research, April 2012, vol. 21 no. 2 215-216
C.J. Brien, (2012) Contribution to the discussion of Optimum design of experiments for statistical inference. Journal of the Royal Statistical Society, Series C, 61, 379.
J. Cai, (2012) Integration of Optical Flow and Dynamic Programming for Stereo Matching, IET Image Processing, 6 (3), 205-212.
J. Cai, (2012) Robust Filtering-Based Thinning Algorithm for Pattern Recognition, The Computer Journal, v55
J. Cai, M. Cespedes, (2012) Plant temperature measurement and analysis from infrared images, was accepted for publication in the proceedings of IVCNZ 2012.
J. Cai, S.J. Miklavcic, (2012) The Automated Extraction of 3D Cereal Plant Structures from 2D Orthographic Images, Journal IET Image Processing, v 6, 687-696.
J. Cai, S.J. Miklavcic, (2012) The Generation of Digital Terrain Models from LiDAR Data using Seeding and Filtering and Its Application to Flood Modelling, Proceedings of the International Conference on Multimedia Technology, 2011.
M.R. Golzarian, M.-K. Lee, J.M.A. Desbiolles, (2012) Evaluation of color indices for improved segmentation of plant images. Transactions of the ASABE, v55(1): 261-273.
B-.L. Huynh, D.E. Mather, A.W. Schreiber, et al. (2012) Clusters of genes encoding fructan biosynthesizing enzymes in wheat and barley, Plant Molecular Biology
P. Kumar, Dick, A. (2012) Adaptive Earth Movers Distance based Bayesian Multi-Target Tracking, Journal of IET Computer Vision, accepted for publication.
P. Kumar, J. Cai, S.J. Miklavcic (2012) Automated detection of root crowns using Gaussian Mixture Models and Bayesian classification, accepted for publication in the proceedings of DICTA 2012.
P. Kumar, J. Cai, S.J. Miklavcic (2012) High-throughput 3D modelling of plants for phenotypic analysis, was accepted for publication in the proceedings of IVCNZ 2012.
P. Kumar, J. Cai, S.J. Miklavcic (2012) Root crown detection using statistics of Zernike moments, was accepted for publication in the proceedings of ICARCV 2012.
H. Laga, S. Kurtek, A. Srivastava, M.R. Golzarian, and S.J. Miklavcic (2012) A Riemannian elastic metric for shape-based plant leaf classification, was accepted for publication in the proceedings of DICTA2012.
H. Laga. (2012). Graspable parts recognition in man-made 3D shapes, was accepted for publication in the proceedings of the Asian Conference on Computer Vision (ACCV) 2012.
H. Rabie, and Saunders, I (2012) A simulation study to assess a variable selection method for selecting single nucleotide polymorphisms associated with disease, Journal of Computational Biology, in press.
P. Sanchez, G. Glonek, A. Metcalfe, (2012) Pareto simulated annealing for the design of experiments: illustrated by a gene expression study, Foundations of Computing and Decision Sciences, v 37(3), p199-221.
G. P. Bisson, C. Mehaffy, C. Broeckling, J. Prenni, D. Rifat, D. S. Lun, M. Burgos, D. Weissman, P. C. Karakousis, and K. Dobos (2012). Upregulation of the phthiocerol dimycocerosate biosynthetic pathway by rifampicin-resistant, rpoB-mutant Mycobacterium tuberculosis. J. Bacteriol., 2012.
A. Brandes, D.S. Lun, K. Ip, J. Zucker, C. Colijn, B. Weiner, and J.E. Galagan. Inferring carbon sources from gene expression profiles using metabolic flux models. PLoS ONE, in press.
Demétrio, C. G.B., Menten, J. F. M., Leandro, R. A. and C.J. Brien (2012) Experimental power considerations — justifying replication for animal care and use committees. Poultry Science, accepted
D. Egen and D.S. Lun. Truncated branch and bound achieves efficient constraint-based genetic design. Bioinformatics, in press.
M.G. Niepielko, K. Ip, J.S. Kanodia, D.S. Lun, and N. Yakoby. Evolution of BMP signaling in Drosophila oogenesis: A receptor-based mechanism. Biophys. J., 102(8):1722-1730, April 2012.
G. Smith, C.J. Brien and H. Ashman (2012) Evaluating implicit judgements from image search click-through data. Accepted for publication in the Journal of the American Society for Information Science and Technology.
A. Torokhti, S.J. Miklavcic (2012) Piecewise interpolation filter for effective processing of large signal sets. International Conference on Electrical, Computer, Electronics and Communication Engineering (ICECECE 2012), Zurich, Switzerland July 5-6, 2012
A. Torokhti, S.J. Miklavcic (2012) Matrix approximation by a sum of rank-constrained matrices. International Congress on Computational and Applied Mathematics (CCAM 2012), Ghent, Belgium July 9-13, 2012
A. Torokhti, S.J. Miklavcic (2012) Best rank constrained operator approximation. International Congress on Computational and Applied Mathematics (CCAM 2012), Ghent, Belgium July 9-13, 2012
A. Torokhti, S.J. Miklavcic (2012) Robust estimation of large data sets by piecewise-linear interpolating estimator. International Workshop on Statistical Modeling (IWSM 2012), Prague, July 16-20, 2012
C.J. Brien, (2011) Factor allocation in gene-expression microarray experiments, International Conference on Design of Experiments (ICODOE-2011), May 10-13, 2011, Memphis, TN, USA
J. Cai, M.R. Golzarian, S.J. Miklavcic (2011) Novel image segmentation based on machine learning and its application to plant analysis, Int. Journal of Information and Electronics Engineering, 1, 79-84.
J. Cai, M.R. Golzarian, S.J. Miklavcic, (2011) Novel image segmentation using Gaussian mixture models - application to plant phenotypic analysis, 3rd International Conference on Signal Acquisition and Processing (ICSAP), 308-312.
J. Cai (2011) High Order LPC Smoothed Spectra for Speech Enhancement, 3rd International Conference on Signal Acquisition and Processing (ICSAP).
J. Cai, (2011) Robust thinning algorithm and Its Applications in pattern recognition and 3D plant modelling, Proceedings of the International Conference on Multimedia Technology, 2011.
M.R. Golzarian, J. Cai, R.A. Frick, S.J. Miklavcic, (2011) Segmentation of cereal plant images using level set methods. A comparative study, Int. Journal of Information and Electronics Engineering, 1, 72-78.
M.R. Golzarian, J. Cai, R.A. Frick, S.J. Miklavcic (2011) A comparative evaluation of level set algorithms with applications for the segmentation of narrow-leaf plants", 3rd International Conference on Signal Acquisition and Processing (ICSAP), pp282-286.
M.R. Golzarian, R.A. Frick, K. Rajendran, B. Berger, S. Roy, M. Tester, D.S. Lun. (2011) Accurate estimation of plant biomass using information extracted from high-throughput plant images, Journal of Plant Methods, 7(2), DOI: 10.1186/1746-4811-7-2.
M.R. Golzarian, R.A. Frick (2011) Classification of wheat, ryegrass and brome grass species at early growth stages using principal component analysis, Journal of Plant Methods, 7(28), Published Sept 2011.
M.R. Golzarian (2011) Adaptive Segmentation of Plant Images, an Integration of Colour Space Features and Self-Organizing Maps, in Proceedings of International Conference on Multimedia Technology, July 2011, Hangzhou, China.
K. Ip, C. Colijn, and D. S. Lun (2011) Analysis of complex metabolic behavior through pathway decomposition. BMC Syst. Biol., 5:91.
J. Aarao, B.H. Bradshaw-Hajek, S.J. Miklavcic, D.A. Ward (2011) Numerical implementation of the EDEM for modified Helmholtz BVPs on annular domains, Journal of Computational and Applied Mathematics, 235, 1342-1353.
A. Eryilmaz, D. S. Lun, and B. T. Swapna. (2011) Control of multi-hop communication networks for inter-session network coding, IEEE Trans. Inform. Theory, 57(2):1092-1110
C. Jungreuthmayer, G.M. Birnbaumer, J. Zanghellini and P. Ertl, (2011) 3D numerical simulation of a Lab-on-a-Chip - Increasing measurement sensitivity of interdigitated capacitors by passivation optimization, Lab On A Chip, 11(7), 1318-1325.
V.L. Nguyen, B.L. Huynh, H. Wallwork and J. Stangoulis (2011) Identification of Quantitative Trait Loci for Grain Arabinoxylan Concentration in Bread Wheat, Crop Science, Vol. 51 No. 3, p. 1143-1150
A. Torokhti and S.J. Miklavcic (2011) Filtering of infinite sets of stochastic signals: an approach based on interpolation techniques, Journal of Signal Processing, 91, pp2556-2566.
B.H. Bradshaw-Hajek; S.J. Miklavcic; L.R. White (2010) The actual dielectric response function for a colloidal suspension of spherical particles, Langmuir, 26(11), pp 7875-7884
B.H. Bradshaw-Hajek; S.J. Miklavcic; L.R. White (2010) High-frequency behaviour of the dynamic mobility and dielectric response of concentrated colloidal dispersions, Langmuir, volume 26(3), pages 1656-1665.
C.J. Brien; R.A. Bailey (2010) Decomposition tables for experiments, 2.Two-one randomizations, The Annals of Statistics, Vol 38 (5), pp 3164-3190
C.J. Brien; S.B. Abreu; W. Skinner (2010) ToF-SIMS as a New Method to Determine the Contact Angle of Mineral Surfaces, Langmuir vol 26(11), pp 8122-8130
J. Cai (2010) Integration of Optical Flow and Dynamic Programming for Stereo Matching, IET Image Processing.
J. Zanghellini; F. Wodlei; H.H. von Gruenberg (2010) Phospholipid demixing and the birth of a lipid drop, J. Theoretical Biology, 264, 952-961.
J. Aarao; B.H. Bradshaw-Hajek; S.J. Miklavcic; D.A. Ward (2010) The extended-domain-eigenfunction method for soliving elliptic boundary value problems with annular domains, Journal of Physics A: Mathematical & Theoretical, volume 43 (18)
H.I.M. Boshoff, D. S. Lun (2010) Systems biology approaches to understanding microbacterial survival mechanisms", Drug Discov. Today: Dis. Mech., 7(1):e75-e82, Invited paper.
X. Shi, D.S. Lun, M. Médard, R. Kötter, J.C. Meldrim; A.J. Barry (2010) Joint base-calling of two DNA sequences with factor graphs, IEEE Trans. Inform. Theory, 56(2):724-733.
A. Torokhti; S.J. Miklavcic (2010) Data compression under constraints of causality and variable finite memory, Signal Processing, 90(10), 2822-2834